Compare Structures
Sails provides a utility tool to compare a structure under investigation to another model. This comparison is completed for all sugars. A sugar will be counted as built if all atoms are within the specified radius of the same atom type in the reference model. This tool may be useful for evaluating the model building output of Sails.
Compare Structures
Syntax:
sails-compare [OPTIONS]
Example:
sails-compare -model built.cif -reference deposited.cif -radius 1
Options
Describe what each option is used for:
- -model
Path to a model that requires comparison to a reference.
Formats accepted: CIF or PDB
Required
- -reference
Path to reference model
Formats accepted: CIF or PDB
Required
- -radius
Radius for atomwise comparison, a larger radius provides are more lenient comparison
Default: 1.5
- -h, --help
Displays help.
Last modified: 08 August 2024